CDS
| Accession Number | TCMCG009C27837 |
| gbkey | CDS |
| Protein Id | XP_030509066.1 |
| Location | complement(join(28314728..28314850,28315263..28315361,28315447..28315518,28315605..28316172,28316275..28316387,28316555..28316654,28316756..28316878,28316998..28317065,28317220..28317372,28317461..28317604,28317708..28317890,28317964..28318048,28318145..28318296,28318420..28318569,28318666..28318719,28318834..28318972,28319074..28319207,28319372..28320319)) |
| Gene | LOC115723729 |
| GeneID | 115723729 |
| Organism | Cannabis sativa |
Protein
| Length | 1135aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA560384 |
| db_source | XM_030653206.1 |
| Definition | DNA repair protein RAD5B [Cannabis sativa] |
EGGNOG-MAPPER Annotation
| COG_category | KL |
| Description | SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03400 [VIEW IN KEGG] |
| KEGG_ko |
ko:K15505
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005737 [VIEW IN EMBL-EBI] GO:0009507 [VIEW IN EMBL-EBI] GO:0009526 [VIEW IN EMBL-EBI] GO:0009536 [VIEW IN EMBL-EBI] GO:0009941 [VIEW IN EMBL-EBI] GO:0031967 [VIEW IN EMBL-EBI] GO:0031975 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044434 [VIEW IN EMBL-EBI] GO:0044435 [VIEW IN EMBL-EBI] GO:0044444 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGAAGCTGATAATGTTGTGGTAATGGCGGAGGAAAATGCGAATAAGGTTTCCTTCATTACTGCGAATAAGGTTTCCTTCATTACTGGGTCCGTTGATGATAATCCTGACCTGCTAACAGTTAGCCGGACGATTACTAGTACAGGGTTTCGGATTTCGGCCCAGAATATCGAAGAAGATTCTGGAGATTCCAAGAAAATGAAGGATGATCATCTGGAGAAGGTGAATAATAAGGTTCTGACTCCTAGAATATCGTTTGATGATTTTTTGAAAGCCACCAATACTCAGGTTATGACTACTGAGGAGTATCTCAAAACCCAAATTAAAGAATCTGCTGAAGTTGGGTTTGAGAAACAGGTGGTATCTGTGAATGAAGTCAAGAAAGGTTCCAACGATGAAATTCTCAGTGTTAAAGCAGTAACAGCAGAAGAAACGGTGAAGCGCAAGACTCTTGTAGAACGATGGTGTGAGGAAGAGGCTTCAAGAAATAATCAAGTCGTGGCGAAACTAGAGAACCCCATTAAAGCTGAACCAATAACGGCTATTGTTCCAGTGAAAGACGAGCCTATTATAGATGCGGAGCCGATTAATTGGGCGAAGGCCATTGTTCCGGTGAAAGAGGAAGAGGCAGTAAGAGAAACATTACGGGAGAGTTTTATCAAGAAGTTCAAAAATGCTCCTGTTAGAGGACCGATTAAGCAGAATCTGCCTGATGCAAAGAAACAGAGAACTGAGAACCAAAACCCTTGTCCCATTCCAGTGGAGGATGGAGACTTCCCTGAAGAGCCCGACTGGTTTTTGGTGGGAAGAACAATGGTGACTGCGCTTTCAACCACTAAAGGCAGGAAGTTGGTGGACAATGAGATTGTCCATTTTGCTTTTCCTTCCACCGATTGGAAATCTAACAGTCGTTGGATTGTTCGCTTTTCGACCAAAAGATATGGAGAGATTGGTAGGCTTCCAATGGAGTGGGGAAAGTGTATTGTTCCTCTTGTAAACTCTGGTAAGGTGAAATTTTTTGGGCGTTGTGTAGCTGCACCAGCAAACCTTTCATTGATGCAAGATATTATTTTATATGTGAGCTTTTACATCCACCGCTCCATATTTACGGAGGATGATAACTCTTCATGGGGATGGAAGCTAGAAGCTGTGCACATTGACTCTACAGTCTACCCCCTCCTCACCTTGTTCAAGCTGTTGAAAATCCAACCGTATCTGAGGGCTGAGTTTACTCCAGAAGAACTTGATTCTCGGAAGCGTCTCTTAGATCTAGAGAGTGCTCCAGATGAAACTGCATCAATGCTGCCTATTGTAAAAAGAAGACAAGGTTGCCAACAGTATCCAGAGCAAAGCAAGGATGAACAAGCTGTTTCTAAGTCATCTATGAATAAAATTGTTGGTGCTGCAGAATCATATAATTTGGAGGAGATGGAACCCCCTAGCAATCTCACTTGTAGTCTAAGGTCATACCAGAAACAGGCCCTTTACTGGATGTCAGAACTGGAAAAGGGAATTGATGTTGAAGAAGCAGCAAAGACTCTTCATCCTTGCTGGGCAGCCTATAAAATAAGTGATGAGAGGGCTTCCTCAATCTATGTCAACCTCTTCTCAGGGGAAGCAACAACCAAATTTCCAACTGCCACACAGATGGCAAGAGGAGGAATTCTAGCAGATGCAATGGGGCTTGGAAAAACTGTTATGACAATTGCTCTAATTCTTAAATGTCCTGGCCATGCTAGTTCTAATAATCAAGGACTTCTCAAAGATTCTCAGACAGACACCTCATCCAAACCAAAAGGCGGCACTCTCATTGTTTGTCCAATGGCTTTGCTAAGTCAGTGGAAGGATGAGCTTGAAACTCACTCAGAGGCAGATAGCATTTCCATATTTGTTCACTATGGCGGGGGAAGGTCAACTAACCCCAAGCTGCTTGCTGAGCATGATGCTGTCTTGACAACATATGGTGTCTTAAGTTCTGCTTATAAATATGATGAAGAGAACAGCATTTTCCACAAGGTGGACTGGTATAGGGTGGTCCTAGATGAAGCTCATATAATAAAGTCTTGGAAGACCCAAGGTGCTCGTGCTGCTTTCACTTTGTCCTCACATTGCAGATGGTGTTTGACAGGAACACCTATTCAGAATAATCTGGAGGACCTCTTCAGCCTCCTATGCTTCTTGCATGTTGAACCATGGTGCAACTGGGCTTGGTGGAACAAATTGATTCAAAAGCCATATGAGAATGGAGATCCTCGAGGCCTTAGACTGATAAAGTCTATTTTGAGACCACTAATGTTGAGAAGAACAAAGGAATCAAAGGACAAAAAAGGAAGGCCCATACTTGTTCTTCCTCCAACTGATATTCAAATTATCGAATGTGAACAATCAGAAGCTGAACGTGACTTCTATGATGCCCTGTTCAAAAGGTCAAAGGTCCAATTTGACCAATTTGTGGCACAAGGGAAAGTCCTACATAATTATGCTAACATTCTTGAACTACTCTTACGGTTGAGGCAGTGTTGCAACCATCCATATCTCGTTATGAGTCGAGGAGATTCACAAAAGTTTGCAGACTTAAACAAGCTTGCCAAAAGATTCCTTGACTTGAATTCTTCATCAGCTCCAGCACCACCCTCCAGAGCCTATGTTGAAGAAGTTGTTGATGGCATTCGACATGGTGATAACTCTGAGTGTCCCATTTGCCTGGAGTCTGCAGATGATGCTGTGCTAACACCCTGCGCTCATAGGATGTGCAGAGAGTGTCTCCTTTCAAGCTGGCGGACACCAGCTGCTGGTCTGTGCCCCATGTGTAGGCAAATCCTCAAAAAAACTGAACTCATAACCTGCCCTTCAGAGAGCAAGTTCCAAGTTGATATCGAGAAGAACTGGAAAGAATCATCAAAGGTTTCTAGTCTCTTGGATTGCTTGGAAAGAATCCGCTCTTCTGGCTCCGGCAAAAAGAGCATTGTTTTCAGTCAGTGGACTACATTTTTGGACCTTTTAGAGATTCCGATGAAGAAGAGTAGAATTGGGTACTTGAGGTATGATGGAGGGCTGTCTCAGAAGCAAAGGGAAAGAGTGTTGAATGAGTTCAATGAAACTAAAGAGAAAATGGTACTACTAATGTCTTTGAGAGCTGGCGGTGTTGGCTTGAACTTAACGGCGGCGTCCAATGTATTCTTAATGGATCCATGGTGGAATCCGGCGGTCGAAGAGCAAGCAATCATGAGAATTCACCGCATCGGTCAAGAAAGAACAGTTTCGGTCCGTAGATTCATCGTCAAGGACACTCTGGAGGAACGCATGCAGCAAGTTCAGGCTAGAAAACAGAGAATGATTGCTGGAGCACTTACTGATGAAGAGGTTCGTTCTGCTAGAATTGAAGAACTCAAAATGCTTTTCAGATGA |
| Protein: MEADNVVVMAEENANKVSFITANKVSFITGSVDDNPDLLTVSRTITSTGFRISAQNIEEDSGDSKKMKDDHLEKVNNKVLTPRISFDDFLKATNTQVMTTEEYLKTQIKESAEVGFEKQVVSVNEVKKGSNDEILSVKAVTAEETVKRKTLVERWCEEEASRNNQVVAKLENPIKAEPITAIVPVKDEPIIDAEPINWAKAIVPVKEEEAVRETLRESFIKKFKNAPVRGPIKQNLPDAKKQRTENQNPCPIPVEDGDFPEEPDWFLVGRTMVTALSTTKGRKLVDNEIVHFAFPSTDWKSNSRWIVRFSTKRYGEIGRLPMEWGKCIVPLVNSGKVKFFGRCVAAPANLSLMQDIILYVSFYIHRSIFTEDDNSSWGWKLEAVHIDSTVYPLLTLFKLLKIQPYLRAEFTPEELDSRKRLLDLESAPDETASMLPIVKRRQGCQQYPEQSKDEQAVSKSSMNKIVGAAESYNLEEMEPPSNLTCSLRSYQKQALYWMSELEKGIDVEEAAKTLHPCWAAYKISDERASSIYVNLFSGEATTKFPTATQMARGGILADAMGLGKTVMTIALILKCPGHASSNNQGLLKDSQTDTSSKPKGGTLIVCPMALLSQWKDELETHSEADSISIFVHYGGGRSTNPKLLAEHDAVLTTYGVLSSAYKYDEENSIFHKVDWYRVVLDEAHIIKSWKTQGARAAFTLSSHCRWCLTGTPIQNNLEDLFSLLCFLHVEPWCNWAWWNKLIQKPYENGDPRGLRLIKSILRPLMLRRTKESKDKKGRPILVLPPTDIQIIECEQSEAERDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPYLVMSRGDSQKFADLNKLAKRFLDLNSSSAPAPPSRAYVEEVVDGIRHGDNSECPICLESADDAVLTPCAHRMCRECLLSSWRTPAAGLCPMCRQILKKTELITCPSESKFQVDIEKNWKESSKVSSLLDCLERIRSSGSGKKSIVFSQWTTFLDLLEIPMKKSRIGYLRYDGGLSQKQRERVLNEFNETKEKMVLLMSLRAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQERTVSVRRFIVKDTLEERMQQVQARKQRMIAGALTDEEVRSARIEELKMLFR |